MANOR: analysis of an array with local bias

2005-11-29, 16:36:45
Profile after normalization: 2372 clones (96%)
<image with normalization>

Spot-level flag report

Flag label Flag code Parameter Flagged spots Flagged spots(%)
Local bias S - 88 1
Negative spot correlation C - 0 0
Low signal to noise ratio (Ref) B 1.25 19 0
Low signal to noise ratio (Dapi) D 1.25 85 1
Poor replicate consistency E 0.1 0 0
Unique spot U - 15 0
not flagged OK - 7185 97

Quality criteria

LabelValue
Local signal variability along the genome 0.021
Average variability among replicates 0.011
Dynamics of the DNA copy number variation 0.399