findNG4Tag {SAGElyzer} | R Documentation |
These are all supporting functions that may of no use out side of thecontext
getDBArgs() getUnixDBArgs(binding = "pg") getBinding(binding = c("pg")) getWinDBArgs() getTag() setKNNArgs() getSLyzerArgs(argName = "SAGELyzerArgs") writeSLyzerArgs(args, argName = "SAGELyzerArgs") modSLyzerArgs(argName, value) setSLyzerArgs() runSLyzer() writeSAGEKNN(knn, targetSAGE) getSAGEKNN() getLibCounts() mapLib2File() linkTag2UG() remapTagNUG(mappings) SAGEFromGEO() procSAGE() mapSAGE2UG() showDBError() findNG4Tag()
binding |
a character string that can be "pg" at this time for PostgreSQL |
argName |
A character string for the name of a argument stored in an environment that can be access for stored information |
args |
Contents that will be written to the environment that can be accessed later |
value |
Same as args above |
knn |
Results form running knn |
targetSAGE |
A character string for a tag sequence that is compared to using knn |
mappings |
A data from that contains mappings between SAGE tags and UniGene ids |
These functions should only be used with the main functions. Users do not need to call them out side of the main functions.
The functions returns various values
J. Zhang
http://www.ncbi.nlm.nih.gov/geo/query/
#No examples provided