list.experiments {SAGx}R Documentation

Display all experiment names and id's

Description

Display all experiment names and id's in the GATC database

Usage

list.experiments(channel, chip = "HG_U95Av2")

Arguments

channel the ODBC channel set up through RODBC
chip the chip type

Details

The GATC database has caused some problems by switching between upper and lower case in an erratic manner. To solve this all names are changed to upper case in the identification of experiments. Thus the function will not distinguish between the experiments 'A' and 'a', but with any sensible naming strategy, the restriction is without consequence

Value

dataframe with column EXPERIMENT

Examples

# Not run
## Not run: 
library(Rodbc)
channel <- odbcConnect(DBN, USRID, PWD) 
ut <- list.experiments(channel, chip = "hu6800")
colnames(ut)
#[1] "EXPERIMENT"  
## End(Not run)

[Package SAGx version 1.12.0 Index]