normalise {SAGx}R Documentation

Normalise arrays

Description

Normalises arrays against a calculated average array, and calibrated linearly in a cube-root scatter plot.

Usage

normalise(x,linear=TRUE)

Arguments

x The data matrix
linear if linear=TRUE then the matrix elements are raised to the power of 3.

Value

normalised version of indata

Author(s)

Per Broberg

References

Tusher, V.G., Tibshirani, R., and Chu, G. (2001) Significance analysis of microarrays applied to the ionizing radiation response. PNAS Vol. 98, no.9, pp. 5116-5121


[Package SAGx version 1.12.0 Index]