ParESet-class {SNPchip}R Documentation

Class "ParESet"

Description

A class containing a list of graphical parameters for plotting objects extending SnpLevelSet

Objects from the Class

Objects can be created by calls of the form new("ParESet", layout, col.axis, cex.main, cex.axis, cex.legend, cex, cex.lab, pch, col, bg, xaxs, xaxt, yaxs, yaxt, lab, adj, bty, ann, useLayout, mar, oma, las, log, ylab, side.ylab, outer.ylab, line.ylab, cex.ylab, xlab, outer.xlab, side.xlab, cex.xlab, line.xlab, outer.axis, line.axis, main, col.centromere, border.centromere, xlim, ylim, one.ylim, add.cytoband, outer.cytoband, outer.cytoband.axis, label.cytoband, use.chromosome.size, label.chromosome, line.label.chromosome, xaxis.side, alternate.xaxis.side, mat, heights, widths, respect, firstChromosome, ...).

Slots

snpPar:
Object of class "list"

Methods

allPlots
signature(object = "ParESet")
initialize
signature(.Object = "ParESet")
plotSnp
signature(object = "ParESet", snpset = "ANY")
snpPar
signature(object = "ParESet")
snpPar<-
signature(object = "ParESet")

Note

Author(s)

References

See Also

ParSnpCallSet-class, ParSnpCopyNumberSet-class, ParSnpSet-class

Examples

showClass("ParESet")

[Package SNPchip version 1.2.1 Index]