getLohProbability {VanillaICE} | R Documentation |
Specifies default emission probabilities for loss of heterozygosity (LOH). We define LOH as a sequence of homozygous genotypes longer than what we would expect to observe by chance.
getLohProbability(object)
object |
Object of one of the HMM classes defined in ICE |
If necessary, more details than the description above
A matrix of default values for the LOH probability