getLohProbability {VanillaICE}R Documentation

Emission probabilities for LOH

Description

Specifies default emission probabilities for loss of heterozygosity (LOH). We define LOH as a sequence of homozygous genotypes longer than what we would expect to observe by chance.

Usage

getLohProbability(object)

Arguments

object Object of one of the HMM classes defined in ICE

Details

If necessary, more details than the description above

Value

A matrix of default values for the LOH probability

Note

Author(s)

References

See Also

Examples






[Package VanillaICE version 1.0.2 Index]