distance {VanillaICE} | R Documentation |
Indicates whether distance between SNPs (in base pairs) was used to estimate transition probabilities for the HMM
distance(object)
object |
one of the HMM classes defined in ICE |
Logical: if TRUE, the distance between SNPs was used to derive a SNP-specific transition probability matrix.
RB Scharpf et al. (2007), Department of Biostatistics Working Papers, Working Paper 136
MA Newton et al. (1998) On the statistical analysis of allelic-loss data. Stat Med 17(13):1425-45