distance {VanillaICE}R Documentation

Accessor for distance

Description

Indicates whether distance between SNPs (in base pairs) was used to estimate transition probabilities for the HMM

Usage

distance(object)

Arguments

object one of the HMM classes defined in ICE

Details

Value

Logical: if TRUE, the distance between SNPs was used to derive a SNP-specific transition probability matrix.

Note

Author(s)

References

RB Scharpf et al. (2007), Department of Biostatistics Working Papers, Working Paper 136

MA Newton et al. (1998) On the statistical analysis of allelic-loss data. Stat Med 17(13):1425-45

See Also

Examples






[Package VanillaICE version 1.0.2 Index]