Different distance measures

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Documentation for package ‘bioDist’ version 1.10.0

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closest.top Find the 'top' closest gene
cor.dist Pearson correlational distance
cor.dist,ExpressionSet-method Pearson correlational distance
cor.dist,exprSet-method Pearson correlational distance
cor.dist,matrix-method Pearson correlational distance
euc Euclidean distance
euc,ExpressionSet-method Euclidean distance
euc,exprSet-method Euclidean distance
euc,matrix-method Euclidean distance
KLD.matrix Continuous version of Kullback-Leibler Distance (KLD)
KLD.matrix,ExpressionSet-method Continuous version of Kullback-Leibler Distance (KLD)
KLD.matrix,exprSet-method Continuous version of Kullback-Leibler Distance (KLD)
KLD.matrix,matrix-method Continuous version of Kullback-Leibler Distance (KLD)
KLdist.matrix Discrete version of Kullback-Leibler Distance (KLD)
KLdist.matrix,ExpressionSet-method Discrete version of Kullback-Leibler Distance (KLD)
KLdist.matrix,exprSet-method Discrete version of Kullback-Leibler Distance (KLD)
KLdist.matrix,matrix-method Discrete version of Kullback-Leibler Distance (KLD)
man Manhattan distance
man,ExpressionSet-method Manhattan distance
man,exprSet-method Manhattan distance
man,matrix-method Manhattan distance
MIdist Mutual Information
MIdist,ExpressionSet-method Mutual Information
MIdist,exprSet-method Mutual Information
MIdist,matrix-method Mutual Information
mutualInfo Mutual Information
mutualInfo,ExpressionSet-method Mutual Information
mutualInfo,exprSet-method Mutual Information
mutualInfo,matrix-method Mutual Information
spearman.dist Spearman correlational distance
spearman.dist,ExpressionSet-method Spearman correlational distance
spearman.dist,exprSet-method Spearman correlational distance
spearman.dist,matrix-method Spearman correlational distance
tau.dist Kendall's tau correlational distance
tau.dist,ExpressionSet-method Kendall's tau correlational distance
tau.dist,exprSet-method Kendall's tau correlational distance
tau.dist,matrix-method Kendall's tau correlational distance