shapeCon-class {cosmo}R Documentation

Class "shapeCon" ~~~

Description

This class defines a constraint concerning the evolution of the information content over an interval

Objects from the Class

Objects can be created by calls of the form new('shapeCon',
shape = ...., # Object of class character
sLower = ...., # Object of class numeric
sUpper = ...., # Object of class numeric
eLower = ...., # Object of class numeric
eUpper = ...., # Object of class numeric
error = ...., # Object of class numeric
) or by: makeShapeCon(
shape = ...., # Object of class character
sLower = ...., # Object of class numeric
sUpper = ...., # Object of class numeric
eLower = ...., # Object of class numeric
eUpper = ...., # Object of class numeric
error = ...., # Object of class numeric
)

Slots

shape:
Object of class "character" This slot describes how the information content varies across the interval: 'Linear', 'Monotone Increasing' and 'Monotone Decreasing' are currently implemented
sLower:
Object of class "numeric" starting lower bound
sUpper:
Object of class "numeric" starting upper bound
eLower:
Object of class "numeric" ending lower bound
eUpper:
Object of class "numeric" ending upper bound
error:
Object of class "numeric" error tolerated

Methods

No methods defined with class "shapeCon" in the signature.

Note

~~further notes~~

Author(s)

Fabian Gallusser, fgallusser@berkeley.edu

References

See Also

boundCon, subMotifCon, posFreqCon, shapeDiffCon, palCon makeConSet

Examples

makeShapeCon("Monotone Increasing",sLower=0,sUpper=1,eLower=1.5,eUpper=2,error=0.5)

[Package cosmo version 1.4.0 Index]