Hidden Variable Dynamic Modeling


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Documentation for package ‘rHVDM’ version 1.4.0

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fitgene Fits the optimal kinetic parameter values for a particular gene.
fiveGyMAS5 Example data for the rHVDM package (time course of irradiated human T cells)
genestoscreen Genes differentially expressed
HVDMcheck Checks that an object of class ExpressionSet is compliant with HVDM
HVDMreport generates an HTML report using the input
p53traingenes Known p53 targets
screening Fits the optimal kinetic parameter values for several genes.
training Performs the HVDM training step and returns a list containing the results