overlap {PCpheno}R Documentation

Count the number of proteins shared by protein complexes

Description

Count the number of proteins shared by protein complexes

Usage

overlap(interactome)

Arguments

interactome Binary matrix composed of genes (rows) and biological complexes (columns) (see package ScISI)

Value

The returned value is a data frame with components:

C1 Name of the first biological complex
C2 Name of the second biological complex
nbSharedProt Number of proteins in common

Author(s)

N. LeMeur

See Also

ScISI

Examples

xx = cbind("a"=c(0,1,1,1),"b"=c(1,1,0,1))
overlap(xx)

[Package PCpheno version 1.2.1 Index]