affycomp | Assessment functions |
affycomp.compfig2 | Auxiliary functions to create comparitive Figures |
affycomp.compfig2b | Auxiliary functions to create comparitive Figures |
affycomp.compfig3 | Auxiliary functions to create comparitive Figures |
affycomp.compfig4a | Auxiliary functions to create comparitive Figures |
affycomp.compfig4b | Auxiliary functions to create comparitive Figures |
affycomp.compfig4c | Auxiliary functions to create comparitive Figures |
affycomp.compfig5a | Auxiliary functions to create comparitive Figures |
affycomp.compfig5b | Auxiliary functions to create comparitive Figures |
affycomp.compfig5c | Auxiliary functions to create comparitive Figures |
affycomp.compfig5cde | Auxiliary functions to create comparitive Figures |
affycomp.compfig5d | Auxiliary functions to create comparitive Figures |
affycomp.compfig5e | Auxiliary functions to create comparitive Figures |
affycomp.compfig7 | SD Assessment Functions |
affycomp.compfigs | Assessment Plots |
affycomp.compfigs.auxiliary | Auxiliary functions to create comparitive Figures |
affycomp.compfigs.calls | Assessment Plots |
affycomp.figure.calls | Assessment Plots |
affycomp.figure1 | Auxiliary functions to create Figures |
affycomp.figure1b | Auxiliary functions to create Figures |
affycomp.figure2 | Auxiliary functions to create Figures |
affycomp.figure2b | Auxiliary functions to create Figures |
affycomp.figure3 | Auxiliary functions to create Figures |
affycomp.figure4a | Auxiliary functions to create Figures |
affycomp.figure4b | Auxiliary functions to create Figures |
affycomp.figure4c | Auxiliary functions to create Figures |
affycomp.figure5a | Auxiliary functions to create Figures |
affycomp.figure5b | Auxiliary functions to create Figures |
affycomp.figure5c | Auxiliary functions to create Figures |
affycomp.figure5d | Auxiliary functions to create Figures |
affycomp.figure5e | Auxiliary functions to create Figures |
affycomp.figure6a | Auxiliary functions to create Figures |
affycomp.figure6b | Auxiliary functions to create Figures |
affycomp.figure7 | SD Assessment Functions |
affycomp.figures | Assessment Plots |
affycomp.figures.auxiliary | Auxiliary functions to create Figures |
affycompPlot | Assessment Plots |
affycompTable | Expression Assessment Table |
assessAll | Assessment functions |
assessDilution | Assessment functions for Dilution Data |
assessFC | Assessment functions for Spike In Data |
assessFC2 | Assessment functions for Spike In Data |
assessLS | New Assessment functions for Spike In Data |
assessMA | Assessment functions for Spike In Data |
assessMA2 | New Assessment functions for Spike In Data |
assessSD | SD Assessment functions |
assessSignal | Assessment functions for Spike In Data |
assessSpikeIn | Assessment functions for Spike In Data |
assessSpikeIn2 | New Assessment functions for Spike In Data |
assessSpikeInSD | New Assessment functions for Spike In Data |
dilution.phenodata | Phenotypic Information for Dilution Study |
exprset.log | Take log base 2 of Expression |
hgu133a.spikein.phenodata | phenotypic information for HGU133A spike in study |
hgu133a.spikein.xhyb | Cross hybridizers |
lw.sd.assessment | An example of the result of an SD assessment |
mas5.assessment | An example of the result of the assessments |
mas5.assessment2 | An example of the result of the assessments |
read.dilution | Read Expression Date Sets |
read.newspikein | Read Expression Date Sets |
read.spikein | Read Expression Date Sets |
readin | Read Expression Date Sets |
remove.hgu133a.xhyb | Remove crosshybridizers |
rma.assessment | An example of the result of an assessment |
rma.assessment2 | An example of the result of an assessment |
rma.sd.assessment | An example of the result of an SD assessment |
SD | SD Assessment Functions |
spikein.phenodata | phenotypic information for spike in study |
tableAll | Expression Assessment Table |
tableDilution | Expression Assessment Table |
tableFC | Expression Assessment Table |
tableFC2 | Expression Assessment Table |
tableLS | Expression Assessment Table |
tableMA2 | Expression Assessment Table |
tableOverallSNR | Expression Assessment Table |
tableRanks | Expression Assessment Table |
tableSD | SD Assessment Functions |
tableSignal | Expression Assessment Table |
tableSpikeInSD | Expression Assessment Table |