NgsPDInfoPkgSeed-class {pdInfoBuilder}R Documentation

Class "NgsPDInfoPkgSeed"

Description

PDInfo package Seed for NimbleGen arrays

Objects from the Class

Objects can be created by calls of the form new("NgsPDInfoPkgSeed", ndfFile, posFile, xysFile, ...).

Slots

ndfFile:
NDF (NimbleGen Design) file
posFile:
POS (Positions) file
xysFile:
XYS File - used as template
chipName:
Design identifier
manufacturer:
Manufacturer: Affymetrix/NimbleGen
genomebuild:
Genome Build
pdInfoObjectName:
object name
geometry:
array dimensions
name:
name
version:
Version
license:
License
author:
Author
email:
Author's email
url:
website
biocViews:
biocViews

Extends

Class "PDInfoPkgSeed", directly. Class "PkgSeed", by class "PDInfoPkgSeed", distance 2.

Methods

chipName
signature(object = "NgsPDInfoPkgSeed"): ...
initialize
signature(.Object = "NgsPDInfoPkgSeed"): ...

Examples

showClass("NgsPDInfoPkgSeed")

[Package pdInfoBuilder version 1.4.0 Index]