AtoR {GeneR} | R Documentation |
Convert addresses of a sequence.
AtoR(adrabs, seqno=0) AtoT(adrabs, seqno=0) RtoA(adrrel, seqno=0) RtoT(adrrel, seqno=0) TtoA(adrver, seqno=0) TtoR(adrver, seqno=0)
adrabs |
Integers (vector). Absolute Addresses |
adrrel |
Integers (vector). Relative Addresses |
adrver |
Integers (vector). Real Addresses |
seqno |
Integer sequence number (bufseq) |
All details on addresses and globals variables are on page globals
.
Vector with new addresses
All results depends on value of Strand. See:
setStrand
, getStrand
.
L. Cottret
AtoT
, RtoA
, RtoT
,
TtoA
,
TtoR
,setStrand
, getStrand
s<-"cgtagtagctagctagctagctagctagc" placeString (s, seqno=0) # s of size 30 address <- c(4,20) # With same strand: it does nothing setStrand(1) AtoR(address) #[1] 26 10 # On reverse strand: setStrand(0) AtoR(address) #[1] 4 20