mergeCor {MergeMaid}R Documentation

Class mergeCor, a class for storing data relevant to integrative correlation coefficients.

Description

This is the class representation for integrative correlation coefficients.

Details

If 'n' is the number of studies then for i < j <= n, the pairwise correlation of correlations for studies i and j is stored in column ((i-1)*(n-1)-(i-2)*(i-1)/2 + j-i) of the pairwise.cors slot.

See Also

mergeCor-class,intCor,modelOutcome, mergeExprSet-class

Examples

  
  data(mergeData)
  merged  <- mergeExprs(sample1,sample2,sample3)
  intcor3  <-intCor(merged,method="pearson")
  plot(intcor3)
  intcor2  <-intCor(merged[1:2],method="kendall")
  plot(intcor2,pch=4,col=5)

  cors(intcor2)
  pairwise.cors(intcor3)
  integrative.cors(intcor3)
  integrative.cors(intcor2)["Hs.12101"]
  

[Package MergeMaid version 2.2.0 Index]