groupCount {goCluster}R Documentation

Count the number of clusters

Description

Counts the number of elements in a tree (list of lists).

Usage

groupCount(X)

Arguments

X A tree (list of lists) of clusters

Details

Traverses a tree from the top to the leave nodes and counts the number of leave nodes or elements.

Value

The number of elements in the tree

Author(s)

Gunnar Wrobel, work@gunnarwrobel.de, http://www.gunnarwrobel.de.

See Also

clusterSignifFDR-class

Examples


set.seed(1000)

data(benomylsetupsmall)

a <- new("goCluster")

execute(a) <- benomylsetupsmall

## Counts the number of clusters that have been analyzed in
## the statistical module of goCluster. This number is the
## product of the number of clusters in a single clustering
## and the number of randomized repeats that were analyzed
## for the FDR analysis
groupCount(a@sign@stat@statset)

[Package goCluster version 1.4.0 Index]