readMage {AffyCompatible} | R Documentation |
This functions reads the content of Affymetrix DTT (MAGE) sample attribute files created by GCOS. Objects are represented as R classes. Navigation and extraction of data are described in the vignette `Retrieving MAGE and ARR sample attributes'.
readMage(fls, ...)
fls |
A character vector containing the paths to files to be read. |
... |
Additional arguments, currently unused. |
An object or list of objects of class ArrayFileSet
, depending
on whether one or several file paths are provided.
Martin Morgan
The vignette `Retrieving MAGE and ARR sample attributes' for detailed illustration of use.
xclass
and readXml
for advanced access
methods.
dir <- system.file("extdata", "DTT", package="AffyCompatible") fls <- list.files(dir, full=TRUE) basename(fls) readArr(fls[[1]])