boxplotNegCtrl {Agi4x44PreProcess}R Documentation

Boxplot of Signals and Negative Controls

Description

For each array, it shows the boxplot for the genes (red) and negative controls (green)

Usage

boxplotNegCtrl(RGlist, Log2, channel)

Arguments

RGlist An RGlist object
Log2 logical, if TRUE it assumes that the data are in log2 scale
channel if 'channel=R', then uses the data stored in dd$R, if channel is missing or 'channel =G' then the data stored in dd$G is used

Details

It allows the comparison of the gene signals with the signals of the negative controls.

Author(s)

Pedro Lopez-Romero

Examples

## Not run: 
        data(dd)
        boxplotNegCtrl(dd,Log2=FALSE,channel="G")
## End(Not run)

[Package Agi4x44PreProcess version 1.2.0 Index]