createGSEAFiles {ArrayTools} | R Documentation |
A Wrapper Function to create *.GCT and *.CLS for GSEA analysis
createGSEAFiles(mydir = getwd(), eSet, catVar)
mydir |
directory where you would like to store the files |
eSet |
an ExpressionSet |
catVar |
variable of interest |
Creating *.GCT and *.CLS for GSEA
Xiwei Wu, Arthur Li
http://www.broad.mit.edu/gsea/
data(eSetExample) ## Not run: createGSEAFiles (mydir, eSetExample, "Treatment")