bicluster {BicARE}R Documentation

Extract a bicluster

Description

Extract a bicluster from an object of class biclustering

Usage

bicluster(biclustering, k, graph=TRUE)

Arguments

biclustering an object of class "biclustering" created by function FLOC
k the number of the bicluster considered in the "biclustering" object
graph boolean, indicating whether the graph should be plotted or not

Value

Returns the bicluster as a matrix with the genes on rows and the samples on columns. Result matrix is of class "bicluster". The "graph" option allows to plot the expression profiles of the genes across the conditions in the bicluster.

Author(s)

Pierre Gestraud

Examples

### extract the first bicluster
data(sample.biclustering)
sample.biclustering
bic <- bicluster(sample.biclustering, 1, graph=TRUE)
plot(bic)

[Package BicARE version 1.0.0 Index]