plotMembershipFunctions {DFP} | R Documentation |
Each gene has 3 Membership Functions (‘Low’, ‘Medium’ and ‘High’) which can be plotted as curves in graphical mode.
In the text mode a membership function is represented with its center and width.
This function receives one or more gene names and plots the results in both graphical and text mode.
If a set of genes containing more than 36 elements is provided, only the text mode is available.
plotMembershipFunctions(rmadataset, mfs, genes)
rmadataset |
An ExpressionSet object with AnnotatedDataFrame metadata. |
mfs |
A list of 3 ExpressionLevel objects (‘Low’, ‘Medium’ and ‘High’) for each gene (a list of lists). |
genes |
The set of genes to plot (a vector). |
A dataframe with the values of the membership functions (‘Low’, ‘Medium’ and ‘High’) for each gene (in rows) received as a parameter.
Rodrigo Alvarez-Gonzalez
Daniel Glez-Pena
Fernando Diaz
Florentino Fdez-Riverola
Maintainer: Rodrigo Alvarez-Gonzalez <rodrigo.djv@uvigo.es>
F. Diaz; F. Fdez-Riverola; D. Glez-Pena; J.M. Corchado. Using Fuzzy Patterns for Gene Selection and Data Reduction on Microarray Data. 7th International Conference on Intelligent Data Engineering and Automated Learning: IDEAL 2006, (2006) pp. 1095-1102