homozygote {GeneticsBase} | R Documentation |
homozygote(object, ...) homozygote.geneSet(object, allele.names, marker, ...) heterozygote(object, ...) heterozygote.geneSet(object, allele.names, marker, ...) carrier(object, ...) carrier.geneSet(object, allele.names, marker, ...) dominant(object, ...) dominant.geneSet(object, allele.names, marker, ...) recessive(object, ...) recessive.geneSet(object, allele.names, marker, ...)
object |
geneSet object |
allele.names |
(optional) allele names. |
marker |
(optional) marker names |
... |
(optional) additional arguments supplied |
matrix of logicals.
Gregory R. Warnes warnes@bst.rochester.edu and Nitin Jain nitin.jain@pfizer.com
data(CAMP) lCAMP <- CAMP[,1:10] # 10 observations # see the genotypes genotypes(lCAMP) # which ones are homozygotes? homozygote(lCAMP) # which ones are carriers for allele "2"? carrier(lCAMP, allele.names="2") # which markers are heterozygotes for marker m709 heterozygote(lCAMP, marker="m709") # if '1' is dominant, which ones will show the # '1' phenotype for marker m47? dominant(lCAMP, allele.names="1", marker="m47") # if '2' is recessive, which ones will show the # '2' phenotype for marker m523? recessive(lCAMP, allele.names="2", marker="p523")