makeIdeogram {GenomeGraphs}R Documentation

Creates object of class Ideogram

Description

Creates object of class Ideogram

Usage

makeIdeogram(chromosome, dp = NULL)

Arguments

chromosome Chromosome to represent (currently human only)
dp Display parameters such as color and size

Value

Object of class Ideogram

Author(s)

Jim Bullard and Steffen Durinck

References

~put references to the literature/web site here ~

See Also

gdPlot

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--    or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (chromosome, dp = NULL) 
{
    if (missing(chromosome)) 
        stop("Need to specify chromosome for creating an Ideogram")
    if (is.numeric(chromosome)) {
        chromosome = as.character(chromosome)
    }
    if (is.null(dp)) 
        dp <- getClass("Ideogram")@prototype@dp
    new("Ideogram", chromosome = chromosome, dp = dp)
  }

[Package GenomeGraphs version 1.2.3 Index]