seqDataEx {GenomeGraphs}R Documentation

This is an example data set from chromosome 4 of yeast from various publicly available datasets.

Description

This was a small dataset constructed from publicly available datasets. Please see references for details.

Usage

data(seqDataEx)

Format

data("seqDataEx", package = "GenomeGraphs") names(seqDataEx)

References

Ugrappa Nagalakshmi et. al. The transcriptional landscape of the yeast genome defined by RNA sequencing. Science, 2008

Lior David et. al. A high-resolution map of transcription in the yeast genome. Proc Natl Acad Sci U S A, (2006)

William Lee A high-resolution atlas of nucleosome occupancy in yeast. Nat Genet, 2007

Adam Siepel, et. al. Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. Genome Res, 2005

Examples

data(seqDataEx)

[Package GenomeGraphs version 1.2.3 Index]