calcGC |
Calculate GC percent |
calcGC,character-method |
Calculate GC percent (methods) |
calcGC,ExpressionSet-method |
Calculate GC percent (methods) |
calcGC,missing-method |
Calculate GC percent (methods) |
calcGC,NULL-method |
Calculate GC percent (methods) |
calcGC-methods |
Calculate GC percent (methods) |
calcPrototype |
Calculate prototype |
calcPrototype,ExpressionSet-method |
Calculate prototype (methods) |
calcPrototype,matrix-method |
Calculate prototype (methods) |
calcPrototype,missing-method |
Calculate prototype (methods) |
calcPrototype,vector-method |
Calculate prototype (methods) |
calcPrototype-methods |
Calculate prototype (methods) |
calcTm |
Calculate Tm |
calcTm,character-method |
Calculate Tm (methods) |
calcTm,ExpressionSet-method |
Calculate Tm (methods) |
calcTm,missing-method |
Calculate Tm (methods) |
calcTm,NULL-method |
Calculate Tm (methods) |
calcTm-methods |
Calculate Tm (methods) |
combineData |
Combine data |
combineData,ExpressionSet,missing,missing-method |
Combine data (methods) |
combineData,ExpressionSet,vector,missing-method |
Combine data (methods) |
combineData,matrix,vector,matrix-method |
Combine data (methods) |
combineData,matrix,vector,missing-method |
Combine data (methods) |
combineData,missing,missing,missing-method |
Combine data (methods) |
combineData,vector,missing,missing-method |
Combine data (methods) |
combineData,vector,missing,vector-method |
Combine data (methods) |
combineData,vector,vector,missing-method |
Combine data (methods) |
combineData,vector,vector,vector-method |
Combine data (methods) |
combineData-methods |
Combine data (methods) |
createWiggle |
Create wiggle track |
createWiggle,ExpressionSet,matrix-method |
Create wiggle track (methods) |
createWiggle,ExpressionSet,missing-method |
Create wiggle track (methods) |
createWiggle,matrix,matrix-method |
Create wiggle track (methods) |
createWiggle,missing,missing-method |
Create wiggle track (methods) |
createWiggle,vector,matrix-method |
Create wiggle track (methods) |
createWiggle-methods |
Create wiggle track (methods) |
getFeatures |
Get features (methods) |
getFeatures,AnnotatedDataFrame,missing-method |
Get features (methods) |
getFeatures,AnnotatedDataFrame,NULL-method |
Get features (methods) |
getFeatures,AnnotatedDataFrame,vector-method |
Get features (methods) |
getFeatures,ExpressionSet,missing-method |
Get features (methods) |
getFeatures,ExpressionSet,NULL-method |
Get features (methods) |
getFeatures,ExpressionSet,vector-method |
Get features (methods) |
getFeatures,matrix,vector-method |
Get features (methods) |
getFeatures,missing,missing-method |
Get features (methods) |
getFeatures,vector,missing-method |
Get features (methods) |
getFeatures,vector,NULL-method |
Get features (methods) |
getFeatures,vector,vector-method |
Get features (methods) |
getFeatures-methods |
Get features (methods) |
getSamples |
Get samples |
getSamples,ExpressionSet,missing-method |
Get samples (methods) |
getSamples,ExpressionSet,NULL-method |
Get samples (methods) |
getSamples,ExpressionSet,vector-method |
Get samples (methods) |
getSamples,matrix,missing-method |
Get samples (methods) |
getSamples,matrix,NULL-method |
Get samples (methods) |
getSamples,matrix,vector-method |
Get samples (methods) |
getSamples,missing,missing-method |
Get samples (methods) |
getSamples,vector,missing-method |
Get samples (methods) |
getSamples,vector,NULL-method |
Get samples (methods) |
getSamples,vector,vector-method |
Get samples (methods) |
getSamples-methods |
Get samples (methods) |
plotBins |
Plot bins |
plotBins,ExpressionSet,ExpressionSet-method |
Plot bins (methods) |
plotBins,ExpressionSet,missing-method |
Plot bins (methods) |
plotBins,ExpressionSet,vector-method |
Plot bins (methods) |
plotBins,matrix,missing-method |
Plot bins (methods) |
plotBins,missing,missing-method |
Plot bins (methods) |
plotBins,vector,ExpressionSet-method |
Plot bins (methods) |
plotBins,vector,missing-method |
Plot bins (methods) |
plotBins,vector,vector-method |
Plot bins (methods) |
plotBins-methods |
Plot bins (methods) |
plotChip |
Plot chip image |
plotChip,ExpressionSet,ExpressionSet,missing-method |
Plot chip image (methods) |
plotChip,ExpressionSet,missing,missing-method |
Plot chip image (methods) |
plotChip,ExpressionSet,vector,missing-method |
Plot chip image (methods) |
plotChip,matrix,missing,missing-method |
Plot chip image (methods) |
plotChip,missing,missing,missing-method |
Plot chip image (methods) |
plotChip,vector,vector,ExpressionSet-method |
Plot chip image (methods) |
plotChip,vector,vector,vector-method |
Plot chip image (methods) |
plotChip-methods |
Plot chip image (methods) |
plotFeature |
Plot feature versus two-color intensity |
plotFeature,ExpressionSet,missing-method |
Plot feature versus two-color intensity (methods) |
plotFeature,ExpressionSet,vector-method |
Plot feature versus two-color intensity (methods) |
plotFeature,matrix,vector-method |
Plot feature versus two-color intensity (methods) |
plotFeature,missing,missing-method |
Plot feature versus two-color intensity (methods) |
plotFeature-methods |
Plot feature versus two-color intensity (methods) |
plotPairs |
Plot tree-pairs |
plotPairs,ExpressionSet-method |
Plot tree-pairs (methods) |
plotPairs,matrix-method |
Plot tree-pairs (methods) |
plotPairs,missing-method |
Plot tree-pairs (methods) |
plotPairs-methods |
Plot tree-pairs (methods) |
quantileNormalize |
Quantile normalization |
quantileNormalize,ExpressionSet,ExpressionSet-method |
Quantile normalization (methods) |
quantileNormalize,ExpressionSet,missing-method |
Quantile normalization (methods) |
quantileNormalize,ExpressionSet,vector-method |
Quantile normalization (methods) |
quantileNormalize,matrix,missing-method |
Quantile normalization (methods) |
quantileNormalize,missing,missing-method |
Quantile normalization (methods) |
quantileNormalize,vector,ExpressionSet-method |
Quantile normalization (methods) |
quantileNormalize,vector,missing-method |
Quantile normalization (methods) |
quantileNormalize,vector,vector-method |
Quantile normalization (methods) |
quantileNormalize-methods |
Quantile normalization (methods) |
readDesign |
Read NimbleGen design files |
readDesign,character,character,character-method |
Read NimbleGen design files (methods) |
readDesign,character,character,ExpressionSet-method |
Read NimbleGen design files (methods) |
readDesign,missing,missing,missing-method |
Read NimbleGen design files (methods) |
readDesign,vector,missing,missing-method |
Read NimbleGen design files (methods) |
readDesign,vector,vector,missing-method |
Read NimbleGen design files (methods) |
readDesign-methods |
Read NimbleGen design files (methods) |
readPairs |
Read Nimblegen .pair files |
readPairs,character,character,character-method |
Read Nimblegen .pair files (methods) |
readPairs,character,character,ExpressionSet-method |
Read Nimblegen .pair files (methods) |
readPairs,missing,missing,missing-method |
Read Nimblegen .pair files (methods) |
readPairs,vector,missing,missing-method |
Read Nimblegen .pair files (methods) |
readPairs,vector,vector,missing-method |
Read Nimblegen .pair files (methods) |
readPairs-methods |
Read Nimblegen .pair files (methods) |
readSampleKey |
Read sample key |