sort.arrayCGH {MANOR} | R Documentation |
Sorts clone-level information of a normalized arrayCGH object.
## S3 method for class 'arrayCGH': sort(x, decreasing = FALSE, position.var="Position", chromosome.var="Chromosome", ...)
x |
an object of type arrayCGH . |
decreasing |
(for compatibility with sort class) currently unused. |
position.var |
name of position variable. |
chromosome.var |
name of chromosome variable. |
... |
further arguments to be passed to sort . |
People interested in tools for array-CGH analysis can visit our web-page: http://bioinfo.curie.fr.
Pierre Neuvial, manor@curie.fr.
data(spatial) ## sort a normalized array by clone position gradient.norm <- sort.arrayCGH(gradient.norm) report.plot(gradient.norm, main="Genomic profile after normalization")