plotRidgeList {MassSpecWavelet}R Documentation

Plot the ridge list

Description

Plot the ridge list returned by getRidge

Usage

plotRidgeList(ridgeList, wCoefs = NULL, range = NULL, colorMap = "RYB", main = NULL, pch = ".", cex = 3, ...)

Arguments

ridgeList returned by getRidge
wCoefs 2-D CWT coefficients
range plot range of m/z index
colorMap colorMap to plot the points of local maximum
main parameter of plot
pch parameter of plot
cex parameter of plot
... other parameters of points

Author(s)

Pan Du

See Also

getRidge

Examples

        data(exampleMS)
        scales <- seq(1, 64, 3)
        wCoefs <- cwt(exampleMS[5000:11000], scales=scales, wavelet='mexh')
        
        localMax <- getLocalMaximumCWT(wCoefs)
        ridgeList <- getRidge(localMax)
        plotRidgeList(ridgeList)

[Package MassSpecWavelet version 1.8.0 Index]