RatioSnpSet-class {SNPchip} | R Documentation |
Container for high throughput SNP data for platforms that provide ratios as SNP-level summaries of copy number
Objects can be created by calls of the form new("RatioSnpSet", calls, callsConfidence, ratio, ratioConfidence, ...)
.
assayData
:"AssayData"
phenoData
:"AnnotatedDataFrame"
featureData
:"AnnotatedDataFrame"
experimentData
:"MIAME"
annotation
:"character"
.__classVersion__
:"Versions"
Class SnpLevelSet
, directly.
Class eSet
, by class "SnpLevelSet", distance 2.
Class VersionedBiobase
, by class "SnpLevelSet", distance 3.
Class Versioned
, by class "SnpLevelSet", distance 4.
signature(object = "RatioSnpSet")
:
Accessor for confidence scores for the ratios signature(object = "RatioSnpSet", value
= "matrix")
: Replacement method for ratio confidence scoressignature(object = "RatioSnpSet")
: Accessor
for ratios. See also ratio
.signature(object = "RatioSnpSet", value =
"matrix")
: Replacement method for ratios. signature(.Object = "RatioSnpSet")
signature(object = "RatioSnpSet")
:
Accessor for confidence scores of the ratios. See also cnConfidence
.RS
showClass("RatioSnpSet")