HmmPredict-class {SNPchip}R Documentation

Class for containing output from a hidden Markov fit to SNP-level data of genotype calls and copy number estimates

Description

Container for HMM predictions

Objects from the Class

Objects can be created by calls of the form new("HmmPredict", assayData, phenoData, featureData, experimentData, annotation, ...).

Slots

states:
Object of class "character"
breakpoints:
Object of class "data.frame"
assayData:
Object of class "AssayData"
phenoData:
Object of class "AnnotatedDataFrame"
featureData:
Object of class "AnnotatedDataFrame"
experimentData:
Object of class "MIAME"
annotation:
Object of class "character"
.__classVersion__:
Object of class "Versions"

Extends

Class SnpLevelSet, directly. Class NULLorHmmPredict, directly. Class eSet, by class "SnpLevelSet", distance 2. Class VersionedBiobase, by class "SnpLevelSet", distance 3. Class Versioned, by class "SnpLevelSet", distance 4.

Methods

No methods defined with class "HmmPredict" in the signature.

Author(s)

RS

Examples

showClass("HmmPredict")

[Package SNPchip version 1.6.0 Index]