copyNumber.emission {VanillaICE} | R Documentation |
Calculate emission probabilities for the copy number
copyNumber.emission(object)
object |
Instance of class HmmOptions |
If copyNumber.ICE
= TRUE in the HmmOptions
object,
then the emission probabilities for the copy number estimates take
into account the confidence scores stored in the cnConfidence slot of
the object inherting from class SnpLevelSet
. The confidence
scores are assumed to be inverse standard errors.
Array of emission probabilities for the copy number estimates (on the log scale)
R. Scharpf