calls.emission {VanillaICE}R Documentation

Calculates emission probabilities for the genotype calls

Description

Emission probabilites for the genotype calls

Usage

calls.emission(object)

Arguments

object Object inheriting from class HmmOptions

Details

If calls.ICE = TRUE in the HmmOptions object, then the emission probabilities for the genotype calls take into account the confidence scores for the called genotypes.

Value

Array of emission probabilities for the genotype calls (on the log scale)

Author(s)

R. Scharpf

See Also

calls.ICE


[Package VanillaICE version 1.4.0 Index]