output {XDE}R Documentation

Options for storing results of the MCMC chains

Description

A numeric vector indicating which chains to write to file and, for those parameters that are written to file, how often the chains should be written to file.

Usage

output(object)

Arguments

object An object of class XdeParameter or XdeMcmc

Details

Replacement methods are only available for objects of class XdeParameter. Accessor methods are available for objects of class XdeParameter and XdeMcmc.

Value

A named numerical vector. The first element (thin) specifies how often to write chains to file. For instance, if output[1]=2 the chains will be written to file every other iteration. Elements 2 - 22 of the vector are indicators for whether to write the write the chains of the Bayesian parameters to file.

Note

Parameters indexed by gene and study (Delta, Phi, Nu, and sigma2) grow very large quickly.

Author(s)

R. Scharpf

See Also

burnin, XdeParameter-class, XdeMcmc-class

Examples

data(xmcmc)
output(xmcmc)

[Package XDE version 1.2.0 Index]