hist.splitSet {adSplit}R Documentation

Overview Histogram for splitSets

Description

Draws a histogram of empirical p-values and shows the corresponding q-values corrected for multiple testing.

Usage

## S3 method for class 'splitSet':
hist(x, main = "Distribution of p-Values", 
              xlab = "p-values", col = "grey", xlim = c(0, 1), ...)

Arguments

x object of type splitSet. Should hold a considerable number of splits.
main main title of the histogram.
xlab legend for the x-axis.
col color for the histogram bars.
xlim limits for the x-axis (p-values).
... further parameters passed on to the default hist function.

Details

This function draws a regular histogram of empirical p-values observed in the splitSet at hand. The corresponding q-values, corrected by the method suggested by Benjamini-Hochberg, are plottet into the same graph. The scale for the q-values is shown at the left hand side of the plot.

Author(s)

Claudio Lottaz

See Also

adSplit

Examples

data(golubKEGGSplits)
hist(golubKEGGSplits, col="red")

[Package adSplit version 1.12.0 Index]