readCcg {affxparser} | R Documentation |
Reads an Affymetrix Command Console Generic (CCG) Data file. The CCG data file format is also known as the Calvin file format.
readCcg(pathname, verbose=0, .filter=NULL, ...)
pathname |
The pathname of the CCG file. |
verbose |
An integer specifying the verbose level. If 0, the
file is parsed quietly. The higher numbers, the more details. |
.filter |
A list . |
... |
Not used. |
Note, the current implementation of this methods does not utilize the Affymetrix Fusion SDK library. Instead, it is implemented in R from the file format definition [1].
A named list
structure consisting of ...
A CCG file, consists of a "file header", a "generic data header", and "data" section, as outlined here:
Henrik Bengtsson (http://www.braju.com/R/)
[1] Affymetrix Inc, Affymetrix GCOS 1.x compatible file formats,
April, 2006.
http://www.affymetrix.com/support/developer/
readCcgHeader
().
readCdfUnits
().