BeadstudioQC {beadarraySNP} | R Documentation |
When data has been imported using a Beadstudio samplesheet and reportfile, these functions can be used to generate quality measures
BeadstudioQC(object, QClist = list(), arrayType = "Sentrix96") pdfBeadstudioQC(QClist, basename = "beadstudio", by = 10)
object |
SnpSetIllumina object. |
QClist |
list, result of previous call to BeadstudioQC |
arrayType |
character, type of array |
basename |
character, prefix for PDF files. This name will be added before the Barcode of the chip |
by |
integer, number of samples in barplot, see reportSamplePanelQC |
The BeadstudioQC
function generates a list of QCIllumina
objects
The pdfBeadstudioQC
function generates a pdf-file for each QCIllumina
object in the list
J. Oosting