ROC-class {cellHTS2} | R Documentation |
Container for data that represent a receiver-operator-characteristic curve, and that were generated
from the data of the annotated positive and negative controls in a
scored cellHTS
object.
new("ROC")
S4method{ROC}{cellHTS}(object, positives, negatives)
with object
being an cellHTS
instance.
name
:assayType
:TP
:FP
:posNames
:negNames
:show
plot
lines
Ligia Bras ligia@ebi.ac.uk, Wolfgang Huber huber@ebi.ac.uk
showClass("ROC") showMethods(class="ROC") ## Not run: data(KcViabSmall) x <- normalizePlates(KcViabSmall, scale="multiplicative", log=FALSE, method="median", varianceAdjust="none") x <- scoreReplicates(x, sign="-", method="zscore") x <- summarizeReplicates(x, summary="mean") y <- ROC(x) plot(y) lines(y, col="green") show(y) ## End(Not run)