getData {edgeR}R Documentation

Extract data table from DGEList object

Description

Returns the data slot of a DGEList object

Usage

 
getData(object) 

Arguments

object matrix of counts for first group

Value

matrix of data (presumably integers)

Author(s)

Mark Robinson

Examples

# generate raw data from NB, create list object
y<-matrix(rnbinom(20,size=1,mu=10),nrow=5)
d<-DGEList(data=y,group=rep(1:2,each=2),lib.size=rep(c(1000:1001),2))
# should be 5x4
print(dim(getData(d)))

[Package edgeR version 1.0.4 Index]