print.gagafit {gaga}R Documentation

Print an object of class gagafit

Description

Prints an object of class gagafit, as returned by fitGG or parest. Provides general information and hyper-parameter estimates, if available.

Usage

print.gagafit(x,...)

Arguments

x Object of type gagafit, as returned by fitGG or parest.
... Other arguments to be passed on to the generic print function.

Details

fitGG does not create a complete gagafit object. The complete object is returned by parest, which computes the posterior probabilities of differential expression and obtain hyper-parameter estimates (these are only provided by fitGG when the option method='EBayes' is used).

Value

Prints number of genes, hypotheses, details about the model fitting and hyper-parameter estimates (when available).

Author(s)

David Rossell

References

Rossell D. GaGa: a simple and flexible hierarchical model for microarray data analysis. http://rosselldavid.googlepages.com.

See Also

fitGG, parest


[Package gaga version 1.2.0 Index]