Identification of SNP Interactions


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Documentation for package ‘logicFS’ version 1.12.0

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cl.logicfs Example Data of logicFS
data.logicfs Example Data of logicFS
getMatEval Evaluate Prime Implicants
logic.bagging Bagged Logic Regression
logic.oob Prime Implicants
logic.pimp Prime Implicants
logicFS Feature Selection with Logic Regression
make.snp.dummy SNPs to Dummy Variables
minDNF Minimum Disjunctive Normal Form
mlogreg Multinomial Logic Regression
plot.logicBagg Variable Importance Plot
plot.logicFS Variable Importance Plot
predict.logicBagg Predict Method for logicBagg objects
predict.mlogreg Predict Method for mlogreg Objects
prime.implicants Minimum Disjunctive Normal Form
print.logicBagg Bagged Logic Regression
print.logicFS Print a logicFS object
print.minDNF Minimum Disjunctive Normal Form
print.mlogreg Multinomial Logic Regression
print.primeImp Minimum Disjunctive Normal Form
vim.chisq ChiSquare Based Importance
vim.ebam EBAM Based Importance
vim.individual VIM for Individual Variables
vim.logicFS Importance Measures
vim.norm Standardized and Permutation Based Importance Measure
vim.perm Standardized and Permutation Based Importance Measure
vim.set VIM for Sets of Variables