lumi-package {lumi} | R Documentation |
lumi R package is designed to preprocess the Illumina microarray (BeadArray) data. It includes functions of Illumina data input, quality control, variance stabilization, normalization and gene annotation.
Package: | lumi |
Type: | Package |
Version: | 1.1.0 |
Date: | 2007-03-23 |
License: | LGPL version 2 or newer |
Pan Du, Simon Lin Maintainer: Pan Du <dupan@northwestern.edu>
1. Du, P., Kibbe, W.A. and Lin, S.M., (2008) 'lumi: a pipeline for processing Illumina microarray', Bioinformatics 24(13):1547-1548
2. Lin, S.M., Du, P., Kibbe, W.A., (2008) 'Model-based Variance-stabilizing Transformation for Illumina Microarray Data', Nucleic Acids Res. 36, e11
3. Du, P., Kibbe, W.A. and Lin, S.M., (2007) 'nuID: A universal naming schema of oligonucleotides for Illumina, Affymetrix, and other microarrays', Biology Direct, 2, 16