ExonFeatureSet-class {oligoClasses} | R Documentation |
Classes to store data from Expression/Exon/SNP/Tiling arrays at the feature level.
Objects can be created by calls of the form new("ExonFeatureSet", assayData, manufacturer, platform, exprs, phenoData, featureData, experimentData, annotation, ...)
.
manufacturer
:"character"
platform
:"character"
assayData
:"AssayData"
phenoData
:"AnnotatedDataFrame"
featureData
:"AnnotatedDataFrame"
experimentData
:"MIAME"
annotation
:"character"
.__classVersion__
:"Versions"
Class FeatureSet
, directly.
Class eSet
, by class "FeatureSet", distance 2.
Class VersionedBiobase
, by class "FeatureSet", distance 3.
Class Versioned
, by class "FeatureSet", distance 4.
No methods defined with class "ExonFeatureSet" in the signature.
Benilton Carvalho
eSet
, VersionedBiobase
, Versioned
set.seed(1) tmp <- 2^matrix(rnorm(100), ncol=4) rownames(tmp) <- 1:25 colnames(tmp) <- paste("sample", 1:4, sep="") efs <- new("ExpressionFeatureSet", exprs=tmp)