SnpCallSetPlus-class {oligoClasses}R Documentation

Class "SnpCallSetPlus"

Description

Description for Genotyping

Objects from the Class

Objects of this class are unions of Quantification and Calls.

Slots

assayData:
Object of class "AssayData"
phenoData:
Object of class "AnnotatedDataFrame"
featureData:
Object of class "AnnotatedDataFrame"
experimentData:
Object of class "MIAME"
annotation:
Object of class "character"
.__classVersion__:
Object of class "Versions"

Extends

Class "SnpQSet", directly. Class "SnpCnvQSet", directly. Class "SnpCallSet", directly. Class "QuantificationSet", by class "SnpQSet", distance 2. Class eSet, by class "SnpQSet", distance 3. Class VersionedBiobase, by class "SnpQSet", distance 4. Class Versioned, by class "SnpQSet", distance 5. Class "QuantificationSet", by class "SnpCnvQSet", distance 2. Class eSet, by class "SnpCnvQSet", distance 3. Class VersionedBiobase, by class "SnpCnvQSet", distance 4. Class Versioned, by class "SnpCnvQSet", distance 5. Class "SnpLevelSet", by class "SnpCallSet", distance 2. Class eSet, by class "SnpCallSet", distance 3. Class VersionedBiobase, by class "SnpCallSet", distance 4. Class Versioned, by class "SnpCallSet", distance 5.

Methods

calculateCopyNumber
signature(object="SnpCallSetPlus") See calculateCopyNumber
db
signature(object="SnpCallSetPlus")

Examples

showClass("SnpCallSetPlus")

[Package oligoClasses version 1.4.0 Index]