separateExptBySize {ppiStats} | R Documentation |
This function partitions protein interaction data into one of three classes defined by boundaries supplied by the users.
separateExptBySize(listOfGraphs, bound1, bound2)
listOfGraphs |
A list containing graphNEL objects to be sorted by the number of edges |
bound1 |
An integer. The strict upper bound for the small scale experiments and the lower bound for the medium scale experiments. |
bound2 |
An integer. The upper bound for the medium scale experiments, and the strict lower bound for the large scale experiments. |
A function to partition graphs based on the number of edges.
A list:
small |
A list of graph objects with the number of edges in each graph less than bound1. |
medium |
A list of graph objects with the number of edges in each graph of a value between that of bound1 and bound2. |
large |
A list of graph objects with the number of edges in each graph greater than bound2. |
T. Chiang