SpeciesReference-class {rsbml} | R Documentation |
Binds a reactant or product Species
to
a Reaction
.
Objects can be created by calls of the form new("SpeciesReference", ...)
.
stoichiometry
:"numeric"
indicating the
(static) stoichiometric coefficient.stoichiometryMath
:"StoichiometryMath"
that dynamically calculates the stoichiometric coefficient.id
:"character"
uniquely identifying this component. species
:"character"
identifying the
Species
being referenced.metaId
:"character"
that is an XML ID
"described" by an RDF resource. This links an SBML element to an RDF
resource. RDF may appear anywhere in an SBML element,
but is usually placed inside the annotation
element.notes
:"character"
containing user-readable XHTML notes about an element. annotation
:"character"
containing
additional machine-readable information about an element, usually as RDF,
such as BioPAX. This is where application-specific data belongs.cvTerms
:"list"
containing
instances of CVTerm
associated with this
element.sboTerm
:"integer"
identifying
a term in the Systems Biology Ontology (SBO).
Class "SimpleSpeciesReference"
, directly.
Class "SBase"
, by class "SimpleSpeciesReference", distance 2.
signature(object = "SpeciesReference")
: gets the stoichiometry
slot signature(object = "SpeciesReference")
: sets the stoichiometry
slot signature(object = "SpeciesReference")
: gets the stoichiometryMath
slot signature(object = "SpeciesReference")
: sets the stoichiometryMath
slot Michael Lawrence