ucscTable {rtracklayer}R Documentation

Get a database table from UCSC

Description

A generic function for getting a database table from UCSC. This is mostly for internal use though some may find it useful.

Usage

ucscTable(object, segment, track, table)

Arguments

object The e.g. ucscSession
segment The genomeSegment for which to retrieve the data.
track The name of the track to which the table belongs.
table The name of the table.

Value

A data.frame of the table.

Author(s)

Michael Lawrence

References

The UCSC Table Browser: http://genome.ucsc.edu/cgi-bin/hgTables.

See Also

trackSet for getting tracks, genomeSequence for getting sequences.


[Package rtracklayer version 1.2.2 Index]