trackSets-class {rtracklayer}R Documentation

Class "trackSets"

Description

A list of trackSet instances.

Objects from the Class

Objects are normally created using the trackSets function.

Slots

.Data:
Object of class "list" containing the tracks.

Extends

Class "list", from data part. Class "vector", by class "list", distance 2. Class "AssayData", by class "list", distance 2.

Methods

export.ucsc(object, con, subformat = c("gff", "wig", "bed"), name = names(object), ...)
Export all tracks in UCSC format.
genomeSegment(object)
Obtain the union of the segments spanned by each track in the list.

Author(s)

Michael Lawrence

See Also

trackSets for obtaining instances of this class.

layTrack for loading the tracks into a genome browser.


[Package rtracklayer version 1.2.2 Index]