ibsDist {snpMatrix} | R Documentation |
Expresses a matrix of IBS counts (see ibsCount
) as a
distance matrix. The distance between two samples is returned as the
proportion of allele comparisons which are not IBS.
ibsDist(counts)
counts |
A matrix of IBS counts as produced by the function
ibsCount |
An object of class "dist"
(see dist
)
David Clayton david.clayton@cimr.cam.ac.uk
data(testdata) ibs <- ibsCount(Xchromosome) distance <- ibsDist(ibs)