barplot.SpliceSites {splicegear}R Documentation

barplot for SpliceSites

Description

Displays a barplot of the associated AnnotatedDataFrame.

Usage

## S3 method for class 'SpliceSites':
barplot(height, type.as = c("typeI", "typeII", "all"),
                    info = "tissue", ...)

Arguments

height object of class SpliceSites-class.
type.as the type of alternative splicing (see SpliteSites-class for further details).
info the name of the covariate in the AnnotatedDataFrame (see details).
... optional parameters to be passed to the underlying function barplot.

Details

When the objects are built from the XML format we propose as an exchange, the parameter info can at least take the values "tissue" and "histology". One can refer to the slots spsiteIpos.pData and spsiteIIpos.pData to know what are the possible choices.

Value

See the value returned by the function barplot.

See Also

SpliceSites-class, barplot

Examples

data(spsites)
barplot(spsites)

[Package splicegear version 1.14.0 Index]