Analysis Report
Sample
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Data Preprocessing
Quality Assessment
Quality Assessment Report includes the following figures: Intensity Distribution, Mean Signal, BAC Spike, polya Spike, Pos Vs Neg Auc, Mad Residual Signal, RLE MEAN, and Hierarchical Clustering of Samples plots
Filtering
Identification of Differentially Expressed Genes
mainEffect | Comparison | Adjusting | Ratio | P | MultCompAdjtmt | StatMethod | Results |
---|---|---|---|---|---|---|---|
Treatment | Treated vs. Control | none | log2(1.5) | 0.05 | none | limma | 24 genes |
Treatment | Treated vs. Control | Group | log2(1.5) | 0.05 | none | limma | 25 genes |
Comparison | Levels | Ratio | P | MultCompAdjtmt | StatMethod | Results |
---|---|---|---|---|---|---|
Treatment X Group | none | log2(1.5) | 0.05 | none | limma | 42 |
Treated vs. Control | A | log2(1.5) | 0.05 | none | limma | 0 |
Treated vs. Control | B | log2(1.5) | 0.05 | none | limma | 0 |