BCRANKresult-class {BCRANK}R Documentation

Class "BCRANKresult"

Description

Holds the results from running bcrank. Contains a number of \code{BCRANKsearch-class} object, one for each restart of the bcrank search.

Slots

fname:
The name of the fasta file used for running bcrank.
toplist:
A list of BCRANKsearch-class objects, ranked by their scores.

Methods

fname
signature(object = "BCRANKmatch"): Returns the fasta file name.
toplist
signature(object = "BCRANKmatch", i=NULL): If i is NULL, returns a data frame containing consensus and score for the results for each restart of the bcrank search. Otherwise, the i'th BCRANKsearch-class object in the toplist is returned.

Author(s)

Adam Ameur, adam.ameur@lcb.uu.se

See Also

bcrank, BCRANKsearch-class,


[Package BCRANK version 1.4.1 Index]