resample {BiocCaseStudies}R Documentation

Resample from ALL ExpressionSet and plot

Description

A function to resample samples from each class of an ExpressionSet and plot the results calculated by a function that returns the number of differentially expressed genes between the classes.

Usage

resample(x, selfun, groupsize = 6 * (1:6), nrep = 25)

Arguments

x An ExpressionSet object derived from the ALL data package.
selfun A function that takes the resampling subset of the ExpressionSet and computes the number of differentially expressed genes between the two classes
groupsize The number of samples for each class
nrep number of iterations of resampling procedure

Value

The function is called for the side effect of producing a plot.

Author(s)

Florian Hahne


[Package BiocCaseStudies version 1.4.0 Index]