chromosomes {CGHbase}R Documentation

Retrieve feature position data from cgh objects.

Description

These generic functions access the position data stored in the featureData of an object derived from the cghRaw-class, cghSeg-class or cghCall-class.

Usage

chromosomes(object)
bpstart(object)
bpend(object)

Arguments

object Object derived from class cghRaw, cghSeg, or cghCall

Value

chromosomes returns a vector of chromosome numbers; bpstart returns a vector of basepair start positions; bpend returns a vector of basepair end positions;

Author(s)

Sjoerd Vosse

See Also

cghRaw-class, cghSeg-class, cghCall-class


[Package CGHbase version 1.0.0 Index]