copynumber {CGHbase} | R Documentation |
These generic functions access the copynumber values
of assay data stored in an object derived from the cghRaw-class
,
cghSeg-class
or cghCall-class
.
copynumber(object) copynumber(object) <- value segmented(object) segmented(object) <- value calls(object) calls(object) <- value
object |
Object derived from class cghRaw , cghSeg , or cghCall |
value |
Matrix with rows representing features and columns samples. |
copynumber
returns a matrix of copynumber values;
Sjoerd Vosse
cghRaw-class
, cghSeg-class
, cghCall-class
data(WiltingCalled) log2ratios <- copynumber(WiltingCalled) segments <- segmented(WiltingCalled) calls <- calls(WiltingCalled)