calculateDiscriminantFuzzyPattern {DFP} | R Documentation |
Calculates the Discriminant Fuzzy Pattern (DFP) that includes those genes present in two or more FPs with different assigned labels.
calculateDiscriminantFuzzyPattern(rmadataset, fps)
rmadataset |
ExpressionSet with numeric values containing gene expression values (rows) of samples belonging to different categories (columns).The ExpressionSet also contains an AnnotatedDataFrame with metadata regarding the classes to which each sample belongs. |
fps |
Genes belonging to each Fuzzy Patterns. There are one FP for each class. Includes an attribute ifs with the Impact Factor for each category. |
Genes belonging to the final DFP.
Includes an attribute ifs with the Impact Factor for each category.
Rodrigo Alvarez-Gonzalez
Daniel Glez-Pena
Fernando Diaz
Florentino Fdez-Riverola
Maintainer: Rodrigo Alvarez-Gonzalez <rodrigo.djv@uvigo.es>
F. Diaz; F. Fdez-Riverola; D. Glez-Pena; J.M. Corchado. Using Fuzzy Patterns for Gene Selection and Data Reduction on Microarray Data. 7th International Conference on Intelligent Data Engineering and Automated Learning: IDEAL 2006, (2006) pp. 1095-1102