DNAcopy {DNAcopy} | R Documentation |
The results of segmenting data from copy number array experiments from programs such as circular binary segmentation (CBS).
An object of class DNAcopy
. There is a print
method
that prints the results in a tabular format. Each row gives the
sample, the chromosome, the start and end map locations, the number of
markers and the mean of each segment.
data |
The original CNA object which was the input for segment |
ID |
sample identifier. |
chrom |
the chromosome within the sample. |
loc.start |
the starting map location of the segment |
loc.end |
the ending map location of the segment |
num.mark |
the number of markers in the segment |
data.type |
the segment mean. |
call |
the call that produced the object. |