analyseCGH {ITALICS} | R Documentation |
Glad Analysis ot the genomic profile
analyseCGH(data, amplicon, deletion, deltaN, forceGL, param, nbsigma, ...)
data |
A data frame containing SNP's intensity, chromosome and position on the genome. data must have a Chr, X and LogRatio columns |
amplicon |
see the amplicon parameter in the daglad function |
deletion |
see the deletion parameter in the daglad function |
deltaN |
see the deltaN parameter in the daglad function |
forceGL |
see the forceGL parameter in the daglad function |
param |
see the param parameter in the daglad function |
nbsigma |
see the nbsigma parameter in the daglad function |
... |
Other daglad parameters. |
An object of class profileCGH. |
People interested in tools dealing with array CGH analysis and DNA copy number analysis can visit our web-page http://bioinfo.curie.fr.
Guillem Rigaill, italics@curie.fr.
Institut Curie, italics@curie.fr.