getConfDat {ITALICS} | R Documentation |
This function eliminate badly predicted probes using a regression table and an estimated model given by the function getModel
or getBestBICModelLight
. Then it computes the corrected intensity.
getConfDat(confidence, quartetInfo, model)
confidence |
The confidence interval : 0.95 |
quartetInfo |
A Regression table containing the variables in the model |
model |
The class lm object given by the function getModel |
A data frame with the corrected intensity. Only goodly predicted probes are taken into account. SNP's with more than 8 badly predicted probes get a NA. |
People interested in tools dealing with array CGH analysis and DNA copy number analysis can visit our web-page http://bioinfo.curie.fr.
Guillem Rigaill, italics@curie.fr.
Institut Curie, italics@curie.fr.