compareReplicaPlates {RNAither}R Documentation

Compare replica plates

Description

Generates plots comparing the same plates in different experiments pairwise.

Usage

compareReplicaPlates(header, dataset, plotTitle, col4val, showPlot)

Arguments

header the header of a dataset file generated with generateDatasetFile
dataset an R data frame generated with generateDatasetFile
plotTitle the plot title
col4val a character string specifying the column whose values will be used for the plot
showPlot 0 or 1. 1 will open one or several plot windows in the R GUI, 0 will only save the plot(s) without opening windows

Value

For each plate, plots of pairwise comparisons between replicate intensities are generated and saved as a pdf file named after the experiment name specified in the header concatenated with the plotTitle .

See Also

compareReplicates

Examples

data(exampleHeader, package="RNAither")
data(exampleDataset, package="RNAither")

compareReplicaPlates(header, dataset, "Comparison of replica plate", "SigIntensity", 1)

[Package RNAither version 1.4.6 Index]