bait {RpsiXML} | R Documentation |
The functions return bait/prey UniProt identifier of the given
psimi25Interaction
object.
bait(x) prey(x) participant(x) inhibitor(x) pubmedID(x) confidenceValue(x) neutralComponent(x)
x |
An object of psimi25Interaction-class , see example |
The source database identifier is returned.
Jitao David Zhang <j.zhang@dkfz.de>, Tony Chiang <tchiang@ebi.ac.uk>
The UniProt database http://www.expasy.uniprot.org/
xmlDir <- system.file("/extdata/psi25files",package="RpsiXML") gridxml <- file.path(xmlDir, "biogrid_200804_test.xml") gridSet <- parsePsimi25Interaction(gridxml, BIOGRID.PSIMI25) interExp <- interactions(gridSet)[[1]] bait(interExp) prey(interExp)