BIOGRID.PSIMI25 {RpsiXML}R Documentation

Supported PSI-MI 2.5 XML data sources

Description

Objects representing supported PSI-MI 2.5 XML data sources. They are implicitly used in interaction and/or complex parsers. The supporting list will grow as soon as there are new PSI-MI 2.5 compatible data sources available.

For usage see examples of parsePsimi25Interaction, parsePsimi25Complex and psimi25XML2Graph.

Details

If a new repository is added manually by the user, please read the notes in psimi25Source-class before coding

References

PSI-MI XML v2.5 data exchange format
http://www.psidev.info/index.php?q=node/60
BioGRID
http://www.thebiogrid.com
DIP
http://dip.doe-mbi.ucla.edu/
HPRD
http://www.hprd.org/
IntAct
http://www.ebi.ac.uk/intact
MINT
http://mint.bio.uniroma2.it/mint
MIPS/CORUM
http://mips.gsf.de/
MPact
http://mips.gsf.de/genre/proj/mpact


[Package RpsiXML version 1.0.0 Index]